The Circumgalactic H-alpha Spectrograph (CHαS) is a ground-based, narrowband optical integral field spectrograph designed to observe ultra-faint extended emission from ionized gas in the nearby universe. Commissioned for use as a facility instrument at MDM observatory, we are currently surveying nearby galaxies to produce deep H-alpha images and velocity maps, complemented with observations in other wavelengths. We present our work developing a robust analysis pipeline for CHαS, providing a toolkit to process images with densely-packed, spatially-resolved spectra. The pipeline includes techniques for astrometric refinement, wavelength mapping and distortion calibration of arrayed spectral images, as well as manipulations in Fourier space. With these, we are able to optimize our image registration and stacking procedures, sky background removal and spectral cube extraction for the tightly packed microlens array images. We highlight results using 5-10h deep image stacks and demonstrate results from cross-correlation with imaging and spectral data from other astronomical surveys.
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