Paper
3 January 2020 Automated brain tumor segmentation using cascaded bootstrapping model
Lihao Qin, Haifeng Zhao, Shaojie Zhang, Zhenyu Tang
Author Affiliations +
Proceedings Volume 11373, Eleventh International Conference on Graphics and Image Processing (ICGIP 2019); 113731B (2020) https://doi.org/10.1117/12.2557245
Event: Eleventh International Conference on Graphics and Image Processing, 2019, Hangzhou, China
Abstract
Brain tumor segmentation is an essential task in image based brain tumor analysis. Many deep learning based (DL) brain tumor segmentation methods have been proposed. They usually segment the brain tumor into three different sub-regions, i.e., the edema (ED), the enhancing tumor (ET) and the necrotic (NCR) from input multi-modal brain images. Some of them treat the brain tumor segmentation as a multi-label classification task, where voxels in the input brain images are classified into one of the four classes (i.e., 3 sub-regions + 1 background) simultaneously. Currently proposed methods decompose the multi-label classification task into separate binary classification tasks, each of which is responsible for classifying one of the three sub-regions. Since binary classification is easier to be optimized than multi-label classification, more accurate segmentation can be achieved by binary classification. However, most of binary classification based methods are not end-to-end, i.e., each DL model is trained to segment one tumor sub-regions separately, and correlations among them are ignored. To solve this issue, in this paper, we propose an end-to-end cascaded bootstrapping DL model, which considers the correlations among different binary classification tasks. Our model contains three levels, through which the whole tumor (WT), the tumor core (TC) and ET are segmented in a cascaded way. More important, each level estimates the corresponding segmentation using the features learnt from the previous level. Moreover, a multi-view fusion is adapted to further boost the segmentation performance. We evaluate our method using BRATS 2017 dataset, and the experimental results show excellent performance on the BRATS 2017 validation set.
© (2020) COPYRIGHT Society of Photo-Optical Instrumentation Engineers (SPIE). Downloading of the abstract is permitted for personal use only.
Lihao Qin, Haifeng Zhao, Shaojie Zhang, and Zhenyu Tang "Automated brain tumor segmentation using cascaded bootstrapping model", Proc. SPIE 11373, Eleventh International Conference on Graphics and Image Processing (ICGIP 2019), 113731B (3 January 2020); https://doi.org/10.1117/12.2557245
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KEYWORDS
Tumors

Brain

Image segmentation

Neuroimaging

Magnetic resonance imaging

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